Cluster: Rep_3268_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3268
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3268_c_2 | Rep_3268_c_2_16 | 15128 | 15922 | - | 3.A.1.34.1 |
| TC | Rep_3268_c_2 | Rep_3268_c_2_17 | 15915 | 16856 | - | 3.A.1.34.1 |
| pfam | Rep_3268_c_2 | Rep_3268_c_2_18 | 16975 | 18000 | - | ABC_sub_bind |
| CAZyme | Rep_3268_c_2 | Rep_3268_c_2_19 | 18255 | 18977 | + | GT26 |
Gene ID: Rep_3268_c_2_16
Type: TC
Location: 15128 - 15922 (-)
Type: TC
Location: 15128 - 15922 (-)
Gene ID: Rep_3268_c_2_17
Type: TC
Location: 15915 - 16856 (-)
Type: TC
Location: 15915 - 16856 (-)
Gene ID: Rep_3268_c_2_18
Type: pfam
Location: 16975 - 18000 (-)
Type: pfam
Location: 16975 - 18000 (-)
Gene ID: Rep_3268_c_2_19
Type: CAZyme
Location: 18255 - 18977 (+)
Type: CAZyme
Location: 18255 - 18977 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM12998
Species
HGM12998 sp900756495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.