Cluster: Rep_3268_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3268
- CGC Family ID: CGCFAM_03458
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3268_c_82 | Rep_3268_c_82_7 | 7463 | 8344 | + | 9.B.126.2.7 |
| pfam | Rep_3268_c_82 | Rep_3268_c_82_8 | 8461 | 9267 | + | adh_short | KR | adh_short_C2 | SDR |
| CAZyme | Rep_3268_c_82 | Rep_3268_c_82_9 | 9346 | 10848 | - | CBM50 |
Gene ID: Rep_3268_c_82_7
Type: TC
Location: 7463 - 8344 (+)
Type: TC
Location: 7463 - 8344 (+)
Gene ID: Rep_3268_c_82_8
Type: pfam
Location: 8461 - 9267 (+)
Type: pfam
Location: 8461 - 9267 (+)
Gene ID: Rep_3268_c_82_9
Type: CAZyme
Location: 9346 - 10848 (-)
Type: CAZyme
Location: 9346 - 10848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM12998
Species
HGM12998 sp900756495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.