Cluster: Rep_3268_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3268
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3268_c_0 | Rep_3268_c_0_43 | 48975 | 50258 | - | GH3 |
| pfam | Rep_3268_c_0 | Rep_3268_c_0_44 | 50255 | 52324 | - | S1 | RNB | OB_RNB | CSD2 |
| pfam | Rep_3268_c_0 | Rep_3268_c_0_45 | 52495 | 52731 | - | SecG |
| TC | Rep_3268_c_0 | Rep_3268_c_0_46 | 52893 | 54881 | - | 3.A.1.134.4 |
| TC | Rep_3268_c_0 | Rep_3268_c_0_47 | 54871 | 55638 | - | 3.A.1.134.12 |
Gene ID: Rep_3268_c_0_43
Type: CAZyme
Location: 48975 - 50258 (-)
Type: CAZyme
Location: 48975 - 50258 (-)
Gene ID: Rep_3268_c_0_44
Type: pfam
Location: 50255 - 52324 (-)
Type: pfam
Location: 50255 - 52324 (-)
Gene ID: Rep_3268_c_0_45
Type: pfam
Location: 52495 - 52731 (-)
Type: pfam
Location: 52495 - 52731 (-)
Gene ID: Rep_3268_c_0_46
Type: TC
Location: 52893 - 54881 (-)
Type: TC
Location: 52893 - 54881 (-)
Gene ID: Rep_3268_c_0_47
Type: TC
Location: 54871 - 55638 (-)
Type: TC
Location: 54871 - 55638 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM12998
Species
HGM12998 sp900756495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3268_c_0_45 | vegetarian > vegan | 2.26175 | 0.00455 |