Cluster: Rep_3267_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3267
- CGC Family ID: CGCFAM_00609
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3267_c_102 | Rep_3267_c_102_2 | 761 | 2044 | + | 3.A.1.1.44 |
| TC | Rep_3267_c_102 | Rep_3267_c_102_3 | 2060 | 2956 | + | 3.A.1.1.11 |
| TC | Rep_3267_c_102 | Rep_3267_c_102_4 | 2972 | 3811 | + | 3.A.1.1.36 |
| CAZyme | Rep_3267_c_102 | Rep_3267_c_102_5 | 3990 | 6176 | + | GH36 |
Gene ID: Rep_3267_c_102_2
Type: TC
Location: 761 - 2044 (+)
Type: TC
Location: 761 - 2044 (+)
Gene ID: Rep_3267_c_102_3
Type: TC
Location: 2060 - 2956 (+)
Type: TC
Location: 2060 - 2956 (+)
Gene ID: Rep_3267_c_102_4
Type: TC
Location: 2972 - 3811 (+)
Type: TC
Location: 2972 - 3811 (+)
Gene ID: Rep_3267_c_102_5
Type: CAZyme
Location: 3990 - 6176 (+)
Type: CAZyme
Location: 3990 - 6176 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
UMGS1766
Species
UMGS1766 sp902475455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3267_c_102_2 | vegetarian > vegan | 1.68297 | 0.02934 |
| Rep_3267_c_102_4 | vegetarian > vegan | 1.61091 | 0.02934 |