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Cluster: Rep_3267_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3267_c_49 Rep_3267_c_49_1 3 2405 - GT35
CAZyme Rep_3267_c_49 Rep_3267_c_49_2 2752 4185 - GT5
pfam Rep_3267_c_49 Rep_3267_c_49_3 4258 5364 - NTP_transferase | Hexapep_GlmU
pfam Rep_3267_c_49 Rep_3267_c_49_4 5361 6572 - NTP_transferase | Hexapep_GlmU
CAZyme Rep_3267_c_49 Rep_3267_c_49_5 6628 8634 - CBM48 | GH13_9
CAZyme Rep_3267_c_49 Rep_3267_c_49_6 8886 9653 + CE4
CAZyme Rep_3267_c_49 Rep_3267_c_49_7 9738 10736 + GT2
NULL(UNKNOWN) Rep_3267_c_49 Rep_3267_c_49_8 10791 11096 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3267_c_49 Rep_3267_c_49_9 11093 12853 - 1.A.33.1.4
Gene ID: Rep_3267_c_49_1
Type: CAZyme
Location: 3 - 2405 (-)
Gene ID: Rep_3267_c_49_2
Type: CAZyme
Location: 2752 - 4185 (-)
Gene ID: Rep_3267_c_49_3
Type: pfam
Location: 4258 - 5364 (-)
Gene ID: Rep_3267_c_49_4
Type: pfam
Location: 5361 - 6572 (-)
Gene ID: Rep_3267_c_49_5
Type: CAZyme
Location: 6628 - 8634 (-)
Gene ID: Rep_3267_c_49_6
Type: CAZyme
Location: 8886 - 9653 (+)
Gene ID: Rep_3267_c_49_7
Type: CAZyme
Location: 9738 - 10736 (+)
Gene ID: Rep_3267_c_49_8
Type:
Location: 10791 - 11096 (-)
Gene ID: Rep_3267_c_49_9
Type: TC
Location: 11093 - 12853 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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