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Cluster: Rep_325_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_325_c_32 Rep_325_c_32_3 3114 6257 - 1.B.14.6.1
pfam Rep_325_c_32 Rep_325_c_32_4 6443 8170 - DUF6377
TF Rep_325_c_32 Rep_325_c_32_5 8191 11115 - GerE
CAZyme Rep_325_c_32 Rep_325_c_32_6 11342 15961 + CBM32 | GH81
NULL(UNKNOWN) Rep_325_c_32 Rep_325_c_32_7 16324 16575 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_325_c_32 Rep_325_c_32_8 16635 17597 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_325_c_32 Rep_325_c_32_9 17644 20892 + GH16_3
CAZyme Rep_325_c_32 Rep_325_c_32_10 20892 22394 + GH128
Gene ID: Rep_325_c_32_3
Type: TC
Location: 3114 - 6257 (-)
Gene ID: Rep_325_c_32_4
Type: pfam
Location: 6443 - 8170 (-)
Gene ID: Rep_325_c_32_5
Type: TF
Location: 8191 - 11115 (-)
Gene ID: Rep_325_c_32_6
Type: CAZyme
Location: 11342 - 15961 (+)
Gene ID: Rep_325_c_32_7
Type:
Location: 16324 - 16575 (+)
Gene ID: Rep_325_c_32_8
Type:
Location: 16635 - 17597 (+)
Gene ID: Rep_325_c_32_9
Type: CAZyme
Location: 17644 - 20892 (+)
Gene ID: Rep_325_c_32_10
Type: CAZyme
Location: 20892 - 22394 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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