Cluster: Rep_325_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_325
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_325_c_72 | Rep_325_c_72_3 | 2354 | 3697 | + | 2.A.1.10.2 |
| pfam | Rep_325_c_72 | Rep_325_c_72_4 | 3712 | 4428 | + | Methyltrans_RNA | PUA_4 |
| pfam | Rep_325_c_72 | Rep_325_c_72_5 | 4444 | 5274 | + | DAHP_synth_1 |
| TC | Rep_325_c_72 | Rep_325_c_72_6 | 5309 | 6766 | - | 1.A.23.4.5 |
| NULL(UNKNOWN) | Rep_325_c_72 | Rep_325_c_72_7 | 6775 | 8070 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_325_c_72 | Rep_325_c_72_8 | 8523 | 8984 | + | NDK |
| CAZyme | Rep_325_c_72 | Rep_325_c_72_9 | 9040 | 9981 | + | CBM50 |
Gene ID: Rep_325_c_72_3
Type: TC
Location: 2354 - 3697 (+)
Type: TC
Location: 2354 - 3697 (+)
Gene ID: Rep_325_c_72_4
Type: pfam
Location: 3712 - 4428 (+)
Type: pfam
Location: 3712 - 4428 (+)
Gene ID: Rep_325_c_72_5
Type: pfam
Location: 4444 - 5274 (+)
Type: pfam
Location: 4444 - 5274 (+)
Gene ID: Rep_325_c_72_6
Type: TC
Location: 5309 - 6766 (-)
Type: TC
Location: 5309 - 6766 (-)
Gene ID: Rep_325_c_72_7
Type:
Location: 6775 - 8070 (-)
Type:
Location: 6775 - 8070 (-)
Gene ID: Rep_325_c_72_8
Type: pfam
Location: 8523 - 8984 (+)
Type: pfam
Location: 8523 - 8984 (+)
Gene ID: Rep_325_c_72_9
Type: CAZyme
Location: 9040 - 9981 (+)
Type: CAZyme
Location: 9040 - 9981 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.