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Cluster: Rep_3256_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3256_c_31 Rep_3256_c_31_7 6790 7986 - 3.A.1.1.26
pfam Rep_3256_c_31 Rep_3256_c_31_8 8274 9365 - Phage_integrase | Phage_int_SAM_3
pfam Rep_3256_c_31 Rep_3256_c_31_9 9630 10175 + CarD_TRCF_RID
CAZyme Rep_3256_c_31 Rep_3256_c_31_10 10241 12085 - CBM50
Gene ID: Rep_3256_c_31_7
Type: TC
Location: 6790 - 7986 (-)
Gene ID: Rep_3256_c_31_8
Type: pfam
Location: 8274 - 9365 (-)
Gene ID: Rep_3256_c_31_9
Type: pfam
Location: 9630 - 10175 (+)
Gene ID: Rep_3256_c_31_10
Type: CAZyme
Location: 10241 - 12085 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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