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Cluster: Rep_3256_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3256_c_20 Rep_3256_c_20_21 17826 18932 - 9.B.10.1.1
TC Rep_3256_c_20 Rep_3256_c_20_22 19070 20434 - 2.A.25.1.3
TF Rep_3256_c_20 Rep_3256_c_20_23 20562 21104 - SpoVT_AbrB
CAZyme Rep_3256_c_20 Rep_3256_c_20_24 21557 23284 + CBM48 | GH13_9
Gene ID: Rep_3256_c_20_21
Type: TC
Location: 17826 - 18932 (-)
Gene ID: Rep_3256_c_20_22
Type: TC
Location: 19070 - 20434 (-)
Gene ID: Rep_3256_c_20_23
Type: TF
Location: 20562 - 21104 (-)
Gene ID: Rep_3256_c_20_24
Type: CAZyme
Location: 21557 - 23284 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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