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Cluster: Rep_324_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_324_c_34 Rep_324_c_34_35 36688 37914 - GT4
pfam Rep_324_c_34 Rep_324_c_34_36 38313 39728 - Bac_DNA_binding
pfam Rep_324_c_34 Rep_324_c_34_37 39743 40018 - Bac_DNA_binding | HU-HIG
CAZyme Rep_324_c_34 Rep_324_c_34_38 40287 41231 - CBM50
pfam Rep_324_c_34 Rep_324_c_34_39 41309 41770 - NDK
TC Rep_324_c_34 Rep_324_c_34_40 42198 43682 + 1.A.23.4.5
pfam Rep_324_c_34 Rep_324_c_34_41 43663 44490 - DAHP_synth_1
pfam Rep_324_c_34 Rep_324_c_34_42 44497 45216 - Methyltrans_RNA | PUA_4
TC Rep_324_c_34 Rep_324_c_34_43 45238 46587 - 2.A.1.10.1
Gene ID: Rep_324_c_34_35
Type: CAZyme
Location: 36688 - 37914 (-)
Gene ID: Rep_324_c_34_36
Type: pfam
Location: 38313 - 39728 (-)
Gene ID: Rep_324_c_34_37
Type: pfam
Location: 39743 - 40018 (-)
Gene ID: Rep_324_c_34_38
Type: CAZyme
Location: 40287 - 41231 (-)
Gene ID: Rep_324_c_34_39
Type: pfam
Location: 41309 - 41770 (-)
Gene ID: Rep_324_c_34_40
Type: TC
Location: 42198 - 43682 (+)
Gene ID: Rep_324_c_34_41
Type: pfam
Location: 43663 - 44490 (-)
Gene ID: Rep_324_c_34_42
Type: pfam
Location: 44497 - 45216 (-)
Gene ID: Rep_324_c_34_43
Type: TC
Location: 45238 - 46587 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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