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Cluster: Rep_324_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_324_c_209 Rep_324_c_209_1 198 926 + GT2
CAZyme Rep_324_c_209 Rep_324_c_209_2 947 1840 + GT2
CAZyme Rep_324_c_209 Rep_324_c_209_3 1869 2939 + GT4
NULL(UNKNOWN) Rep_324_c_209 Rep_324_c_209_4 2921 3010 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_324_c_209 Rep_324_c_209_5 3221 3817 + 9.B.18.1.3
pfam Rep_324_c_209 Rep_324_c_209_6 3820 5007 + Glycos_transf_2 | Glyco_tranf_2_3
pfam Rep_324_c_209 Rep_324_c_209_7 5090 5800 + Methyltransf_4 | Methyltransf_25 | Methyltransf_31
TC Rep_324_c_209 Rep_324_c_209_8 5892 7169 + 2.A.66.10.1
Gene ID: Rep_324_c_209_1
Type: CAZyme
Location: 198 - 926 (+)
Gene ID: Rep_324_c_209_2
Type: CAZyme
Location: 947 - 1840 (+)
Gene ID: Rep_324_c_209_3
Type: CAZyme
Location: 1869 - 2939 (+)
Gene ID: Rep_324_c_209_4
Type:
Location: 2921 - 3010 (-)
Gene ID: Rep_324_c_209_5
Type: TC
Location: 3221 - 3817 (+)
Gene ID: Rep_324_c_209_6
Type: pfam
Location: 3820 - 5007 (+)
Gene ID: Rep_324_c_209_7
Type: pfam
Location: 5090 - 5800 (+)
Gene ID: Rep_324_c_209_8
Type: TC
Location: 5892 - 7169 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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