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Cluster: Rep_3242_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3242_c_13 Rep_3242_c_13_5 5449 7860 - GT35
CAZyme Rep_3242_c_13 Rep_3242_c_13_6 7866 9602 - GT5
pfam Rep_3242_c_13 Rep_3242_c_13_7 9627 10739 - NTP_transferase | Hexapep_GlmU
pfam Rep_3242_c_13 Rep_3242_c_13_8 10736 11944 - NTP_transferase | Hexapep_GlmU
CAZyme Rep_3242_c_13 Rep_3242_c_13_9 12044 13969 - CBM48 | GH13_9
TC Rep_3242_c_13 Rep_3242_c_13_10 14263 15075 + 2.A.102.3.1
pfam Rep_3242_c_13 Rep_3242_c_13_11 15093 15812 + Asp_Glu_race
TC Rep_3242_c_13 Rep_3242_c_13_12 15977 17197 + 2.A.23.1.5
Gene ID: Rep_3242_c_13_5
Type: CAZyme
Location: 5449 - 7860 (-)
Gene ID: Rep_3242_c_13_6
Type: CAZyme
Location: 7866 - 9602 (-)
Gene ID: Rep_3242_c_13_7
Type: pfam
Location: 9627 - 10739 (-)
Gene ID: Rep_3242_c_13_8
Type: pfam
Location: 10736 - 11944 (-)
Gene ID: Rep_3242_c_13_9
Type: CAZyme
Location: 12044 - 13969 (-)
Gene ID: Rep_3242_c_13_10
Type: TC
Location: 14263 - 15075 (+)
Gene ID: Rep_3242_c_13_11
Type: pfam
Location: 15093 - 15812 (+)
Gene ID: Rep_3242_c_13_12
Type: TC
Location: 15977 - 17197 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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