Cluster: Rep_3242_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3242
- CGC Family ID: CGCFAM_00912
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3242_c_12 | Rep_3242_c_12_3 | 1845 | 2480 | + | 2.A.87.1.2 |
| pfam | Rep_3242_c_12 | Rep_3242_c_12_4 | 2532 | 3023 | - | DUF4330 |
| CAZyme | Rep_3242_c_12 | Rep_3242_c_12_5 | 3120 | 5363 | + | GT4 |
| NULL(UNKNOWN) | Rep_3242_c_12 | Rep_3242_c_12_6 | 5386 | 5583 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3242_c_12 | Rep_3242_c_12_7 | 5627 | 6346 | - | DUF421 |
| TC | Rep_3242_c_12 | Rep_3242_c_12_8 | 6401 | 7702 | - | 2.A.49.9.2 |
Gene ID: Rep_3242_c_12_3
Type: TC
Location: 1845 - 2480 (+)
Type: TC
Location: 1845 - 2480 (+)
Gene ID: Rep_3242_c_12_4
Type: pfam
Location: 2532 - 3023 (-)
Type: pfam
Location: 2532 - 3023 (-)
Gene ID: Rep_3242_c_12_5
Type: CAZyme
Location: 3120 - 5363 (+)
Type: CAZyme
Location: 3120 - 5363 (+)
Gene ID: Rep_3242_c_12_6
Type:
Location: 5386 - 5583 (-)
Type:
Location: 5386 - 5583 (-)
Gene ID: Rep_3242_c_12_7
Type: pfam
Location: 5627 - 6346 (-)
Type: pfam
Location: 5627 - 6346 (-)
Gene ID: Rep_3242_c_12_8
Type: TC
Location: 6401 - 7702 (-)
Type: TC
Location: 6401 - 7702 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Dysosmobacter
Species
Dysosmobacter faecalis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.