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Cluster: Rep_3242_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3242_c_2 Rep_3242_c_2_2 915 2336 + 2.A.50.2.1
NULL(UNKNOWN) Rep_3242_c_2 Rep_3242_c_2_3 2354 3436 + NULL(UNKNOWN)
[View Structural Homologs]
sulfatase Rep_3242_c_2 Rep_3242_c_2_4 3459 5264 + S1_97
TC Rep_3242_c_2 Rep_3242_c_2_5 5714 6562 - 3.A.1.24.5
TC Rep_3242_c_2 Rep_3242_c_2_6 6692 7432 - 3.A.1.24.5
TC Rep_3242_c_2 Rep_3242_c_2_7 7425 8429 - 3.A.1.24.1
NULL(UNKNOWN) Rep_3242_c_2 Rep_3242_c_2_8 8514 8618 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3242_c_2 Rep_3242_c_2_9 8848 10119 - GH18
TC Rep_3242_c_2 Rep_3242_c_2_10 10230 10667 - 9.A.11.1.1
Gene ID: Rep_3242_c_2_2
Type: TC
Location: 915 - 2336 (+)
Gene ID: Rep_3242_c_2_3
Type:
Location: 2354 - 3436 (+)
Gene ID: Rep_3242_c_2_4
Type: sulfatase
Location: 3459 - 5264 (+)
Gene ID: Rep_3242_c_2_5
Type: TC
Location: 5714 - 6562 (-)
Gene ID: Rep_3242_c_2_6
Type: TC
Location: 6692 - 7432 (-)
Gene ID: Rep_3242_c_2_7
Type: TC
Location: 7425 - 8429 (-)
Gene ID: Rep_3242_c_2_8
Type:
Location: 8514 - 8618 (-)
Gene ID: Rep_3242_c_2_9
Type: CAZyme
Location: 8848 - 10119 (-)
Gene ID: Rep_3242_c_2_10
Type: TC
Location: 10230 - 10667 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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