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Cluster: Rep_3242_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3242_c_1 Rep_3242_c_1_77 88325 89689 + 3.D.6.1.2
TC Rep_3242_c_1 Rep_3242_c_1_78 89693 90712 + 3.D.6.1.2
TC Rep_3242_c_1 Rep_3242_c_1_79 90709 91326 + 3.D.6.1.2
TC Rep_3242_c_1 Rep_3242_c_1_80 91346 91978 + 3.D.6.1.2
TC Rep_3242_c_1 Rep_3242_c_1_81 91978 92565 + 3.D.6.1.2
TC Rep_3242_c_1 Rep_3242_c_1_82 92579 93481 + 3.D.6.1.3
CAZyme Rep_3242_c_1 Rep_3242_c_1_83 93540 95072 - GH77
Gene ID: Rep_3242_c_1_77
Type: TC
Location: 88325 - 89689 (+)
Gene ID: Rep_3242_c_1_78
Type: TC
Location: 89693 - 90712 (+)
Gene ID: Rep_3242_c_1_79
Type: TC
Location: 90709 - 91326 (+)
Gene ID: Rep_3242_c_1_80
Type: TC
Location: 91346 - 91978 (+)
Gene ID: Rep_3242_c_1_81
Type: TC
Location: 91978 - 92565 (+)
Gene ID: Rep_3242_c_1_82
Type: TC
Location: 92579 - 93481 (+)
Gene ID: Rep_3242_c_1_83
Type: CAZyme
Location: 93540 - 95072 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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