Cluster: Rep_3236_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3236
- CGC Family ID: CGCFAM_01359
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3236_c_48 | Rep_3236_c_48_8 | 8629 | 10029 | - | 9.A.11.1.1 |
| CAZyme | Rep_3236_c_48 | Rep_3236_c_48_9 | 10147 | 11043 | - | GH25 |
| pfam | Rep_3236_c_48 | Rep_3236_c_48_10 | 11045 | 11641 | - | Flavodoxin_2 | FMN_red |
| pfam | Rep_3236_c_48 | Rep_3236_c_48_11 | 11655 | 12479 | - | PCMT | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 | Zn_ribbon_RlmA |
| TC | Rep_3236_c_48 | Rep_3236_c_48_12 | 12479 | 13870 | - | 2.A.66.1.45 |
Gene ID: Rep_3236_c_48_8
Type: TC
Location: 8629 - 10029 (-)
Type: TC
Location: 8629 - 10029 (-)
Gene ID: Rep_3236_c_48_9
Type: CAZyme
Location: 10147 - 11043 (-)
Type: CAZyme
Location: 10147 - 11043 (-)
Gene ID: Rep_3236_c_48_10
Type: pfam
Location: 11045 - 11641 (-)
Type: pfam
Location: 11045 - 11641 (-)
Gene ID: Rep_3236_c_48_11
Type: pfam
Location: 11655 - 12479 (-)
Type: pfam
Location: 11655 - 12479 (-)
Gene ID: Rep_3236_c_48_12
Type: TC
Location: 12479 - 13870 (-)
Type: TC
Location: 12479 - 13870 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp934565655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.