Cluster: Rep_3236_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3236
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3236_c_44 | Rep_3236_c_44_3 | 3248 | 5992 | + | 3.A.5.1.3 |
| pfam | Rep_3236_c_44 | Rep_3236_c_44_4 | 6199 | 7002 | + | Cu-oxidase_4 |
| TC | Rep_3236_c_44 | Rep_3236_c_44_5 | 6999 | 8561 | + | 3.A.1.5.11 |
| TF | Rep_3236_c_44 | Rep_3236_c_44_6 | 8596 | 9234 | - | LexA_DNA_bind |
| pfam | Rep_3236_c_44 | Rep_3236_c_44_7 | 9434 | 9676 | + | SecG |
| CAZyme | Rep_3236_c_44 | Rep_3236_c_44_8 | 9724 | 10443 | - | CE4 |
Gene ID: Rep_3236_c_44_3
Type: TC
Location: 3248 - 5992 (+)
Type: TC
Location: 3248 - 5992 (+)
Gene ID: Rep_3236_c_44_4
Type: pfam
Location: 6199 - 7002 (+)
Type: pfam
Location: 6199 - 7002 (+)
Gene ID: Rep_3236_c_44_5
Type: TC
Location: 6999 - 8561 (+)
Type: TC
Location: 6999 - 8561 (+)
Gene ID: Rep_3236_c_44_6
Type: TF
Location: 8596 - 9234 (-)
Type: TF
Location: 8596 - 9234 (-)
Gene ID: Rep_3236_c_44_7
Type: pfam
Location: 9434 - 9676 (+)
Type: pfam
Location: 9434 - 9676 (+)
Gene ID: Rep_3236_c_44_8
Type: CAZyme
Location: 9724 - 10443 (-)
Type: CAZyme
Location: 9724 - 10443 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp934565655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.