Cluster: Rep_3236_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3236
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3236_c_17 | Rep_3236_c_17_14 | 16673 | 18010 | + | 2.A.40.1.4 |
| CAZyme | Rep_3236_c_17 | Rep_3236_c_17_15 | 18125 | 19660 | - | GH77 |
| TC | Rep_3236_c_17 | Rep_3236_c_17_16 | 19918 | 20820 | - | 3.A.1.1.45 |
| TC | Rep_3236_c_17 | Rep_3236_c_17_17 | 20820 | 21743 | - | 3.A.1.1.45 |
| TC | Rep_3236_c_17 | Rep_3236_c_17_18 | 21890 | 23212 | - | 3.A.1.1.45 |
Gene ID: Rep_3236_c_17_14
Type: TC
Location: 16673 - 18010 (+)
Type: TC
Location: 16673 - 18010 (+)
Gene ID: Rep_3236_c_17_15
Type: CAZyme
Location: 18125 - 19660 (-)
Type: CAZyme
Location: 18125 - 19660 (-)
Gene ID: Rep_3236_c_17_16
Type: TC
Location: 19918 - 20820 (-)
Type: TC
Location: 19918 - 20820 (-)
Gene ID: Rep_3236_c_17_17
Type: TC
Location: 20820 - 21743 (-)
Type: TC
Location: 20820 - 21743 (-)
Gene ID: Rep_3236_c_17_18
Type: TC
Location: 21890 - 23212 (-)
Type: TC
Location: 21890 - 23212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp934565655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.