Cluster: Rep_3236_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3236
- CGC Family ID: CGCFAM_00412
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3236_c_95 | Rep_3236_c_95_2 | 1430 | 2674 | + | GT2 |
| TC | Rep_3236_c_95 | Rep_3236_c_95_3 | 2908 | 3672 | + | 3.A.1.134.9 |
| TC | Rep_3236_c_95 | Rep_3236_c_95_4 | 3669 | 5300 | + | 3.A.1.134.9 |
| TC | Rep_3236_c_95 | Rep_3236_c_95_5 | 5344 | 6099 | - | 2.A.5.5.2 |
| TC | Rep_3236_c_95 | Rep_3236_c_95_6 | 6202 | 7026 | - | 3.A.1.132.3 |
Gene ID: Rep_3236_c_95_2
Type: CAZyme
Location: 1430 - 2674 (+)
Type: CAZyme
Location: 1430 - 2674 (+)
Gene ID: Rep_3236_c_95_3
Type: TC
Location: 2908 - 3672 (+)
Type: TC
Location: 2908 - 3672 (+)
Gene ID: Rep_3236_c_95_4
Type: TC
Location: 3669 - 5300 (+)
Type: TC
Location: 3669 - 5300 (+)
Gene ID: Rep_3236_c_95_5
Type: TC
Location: 5344 - 6099 (-)
Type: TC
Location: 5344 - 6099 (-)
Gene ID: Rep_3236_c_95_6
Type: TC
Location: 6202 - 7026 (-)
Type: TC
Location: 6202 - 7026 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp934565655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.