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Cluster: Rep_3236_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3236_c_2 Rep_3236_c_2_8 7531 8211 + 3.A.1.122.2
pfam Rep_3236_c_2 Rep_3236_c_2_9 8204 9982 + Biotin_lipoyl_2
TC Rep_3236_c_2 Rep_3236_c_2_10 9995 11242 + 3.A.1.122.2
CAZyme Rep_3236_c_2 Rep_3236_c_2_11 11611 13479 + CBM48 | GH13_9
pfam Rep_3236_c_2 Rep_3236_c_2_12 13516 14730 + NTP_transferase | Hexapep_GlmU
pfam Rep_3236_c_2 Rep_3236_c_2_13 14727 15839 + NTP_transferase | Hexapep_GlmU
CAZyme Rep_3236_c_2 Rep_3236_c_2_14 16042 17469 + GT5
CAZyme Rep_3236_c_2 Rep_3236_c_2_15 17484 19904 + GT35
Gene ID: Rep_3236_c_2_8
Type: TC
Location: 7531 - 8211 (+)
Gene ID: Rep_3236_c_2_9
Type: pfam
Location: 8204 - 9982 (+)
Gene ID: Rep_3236_c_2_10
Type: TC
Location: 9995 - 11242 (+)
Gene ID: Rep_3236_c_2_11
Type: CAZyme
Location: 11611 - 13479 (+)
Gene ID: Rep_3236_c_2_12
Type: pfam
Location: 13516 - 14730 (+)
Gene ID: Rep_3236_c_2_13
Type: pfam
Location: 14727 - 15839 (+)
Gene ID: Rep_3236_c_2_14
Type: CAZyme
Location: 16042 - 17469 (+)
Gene ID: Rep_3236_c_2_15
Type: CAZyme
Location: 17484 - 19904 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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