Cluster: Rep_3232_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3232
- CGC Family ID: CGCFAM_00088
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3232_c_11 | Rep_3232_c_11_21 | 18626 | 19918 | + | 3.A.1.1.45 |
| TC | Rep_3232_c_11 | Rep_3232_c_11_22 | 20079 | 20930 | + | 3.A.1.1.45 |
| TC | Rep_3232_c_11 | Rep_3232_c_11_23 | 20930 | 21772 | + | 3.A.1.1.45 |
| CAZyme | Rep_3232_c_11 | Rep_3232_c_11_24 | 21895 | 23436 | + | GH77 |
| TC | Rep_3232_c_11 | Rep_3232_c_11_25 | 23546 | 24883 | - | 2.A.40.1.4 |
Gene ID: Rep_3232_c_11_21
Type: TC
Location: 18626 - 19918 (+)
Type: TC
Location: 18626 - 19918 (+)
Gene ID: Rep_3232_c_11_22
Type: TC
Location: 20079 - 20930 (+)
Type: TC
Location: 20079 - 20930 (+)
Gene ID: Rep_3232_c_11_23
Type: TC
Location: 20930 - 21772 (+)
Type: TC
Location: 20930 - 21772 (+)
Gene ID: Rep_3232_c_11_24
Type: CAZyme
Location: 21895 - 23436 (+)
Type: CAZyme
Location: 21895 - 23436 (+)
Gene ID: Rep_3232_c_11_25
Type: TC
Location: 23546 - 24883 (-)
Type: TC
Location: 23546 - 24883 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Vescimonas
Species
Vescimonas sp900548615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.