Cluster: Rep_3208_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3208
- CGC Family ID: CGCFAM_01337
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3208_c_7 | Rep_3208_c_7_60 | 60777 | 61436 | - | 9.B.149.1.11 |
| TF | Rep_3208_c_7 | Rep_3208_c_7_61 | 61610 | 61867 | - | HTH_3 |
| pfam | Rep_3208_c_7 | Rep_3208_c_7_62 | 62115 | 62897 | + | VTT_dom |
| CAZyme | Rep_3208_c_7 | Rep_3208_c_7_63 | 62894 | 64147 | + | GT2 |
| NULL(UNKNOWN) | Rep_3208_c_7 | Rep_3208_c_7_64 | 64206 | 64922 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_3208_c_7 | Rep_3208_c_7_65 | 64935 | 65594 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3208_c_7 | Rep_3208_c_7_66 | 65584 | 66465 | - | 3.A.1.132.6 |
Gene ID: Rep_3208_c_7_60
Type: TC
Location: 60777 - 61436 (-)
Type: TC
Location: 60777 - 61436 (-)
Gene ID: Rep_3208_c_7_61
Type: TF
Location: 61610 - 61867 (-)
Type: TF
Location: 61610 - 61867 (-)
Gene ID: Rep_3208_c_7_62
Type: pfam
Location: 62115 - 62897 (+)
Type: pfam
Location: 62115 - 62897 (+)
Gene ID: Rep_3208_c_7_63
Type: CAZyme
Location: 62894 - 64147 (+)
Type: CAZyme
Location: 62894 - 64147 (+)
Gene ID: Rep_3208_c_7_64
Type:
Location: 64206 - 64922 (-)
Type:
Location: 64206 - 64922 (-)
Gene ID: Rep_3208_c_7_65
Type:
Location: 64935 - 65594 (-)
Type:
Location: 64935 - 65594 (-)
Gene ID: Rep_3208_c_7_66
Type: TC
Location: 65584 - 66465 (-)
Type: TC
Location: 65584 - 66465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp902373635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.