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Cluster: Rep_3208_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3208_c_1 Rep_3208_c_1_78 99746 100333 - 2.A.87.1.3
pfam Rep_3208_c_1 Rep_3208_c_1_79 100651 101157 + YpsA
TC Rep_3208_c_1 Rep_3208_c_1_80 101410 102804 - 2.A.66.1.4
STP Rep_3208_c_1 Rep_3208_c_1_81 103092 103736 - TrkA_C
TC Rep_3208_c_1 Rep_3208_c_1_82 103748 105094 - 2.A.38.4.1
TC Rep_3208_c_1 Rep_3208_c_1_83 105330 107153 + 2.A.58.2.2
CAZyme Rep_3208_c_1 Rep_3208_c_1_84 107238 108713 - CE4
Gene ID: Rep_3208_c_1_78
Type: TC
Location: 99746 - 100333 (-)
Gene ID: Rep_3208_c_1_79
Type: pfam
Location: 100651 - 101157 (+)
Gene ID: Rep_3208_c_1_80
Type: TC
Location: 101410 - 102804 (-)
Gene ID: Rep_3208_c_1_81
Type: STP
Location: 103092 - 103736 (-)
Gene ID: Rep_3208_c_1_82
Type: TC
Location: 103748 - 105094 (-)
Gene ID: Rep_3208_c_1_83
Type: TC
Location: 105330 - 107153 (+)
Gene ID: Rep_3208_c_1_84
Type: CAZyme
Location: 107238 - 108713 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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