Cluster: Rep_3208_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3208_c_75 | Rep_3208_c_75_3 | 2156 | 3874 | - | CBM34 | GH13_20 |
| TC | Rep_3208_c_75 | Rep_3208_c_75_4 | 3871 | 4713 | - | 3.A.1.1.6 |
| TC | Rep_3208_c_75 | Rep_3208_c_75_5 | 4710 | 5579 | - | 3.A.1.1.2 |
| TC | Rep_3208_c_75 | Rep_3208_c_75_6 | 5608 | 6807 | - | 3.A.1.1.16 |
Gene ID: Rep_3208_c_75_3
Type: CAZyme
Location: 2156 - 3874 (-)
Type: CAZyme
Location: 2156 - 3874 (-)
Gene ID: Rep_3208_c_75_4
Type: TC
Location: 3871 - 4713 (-)
Type: TC
Location: 3871 - 4713 (-)
Gene ID: Rep_3208_c_75_5
Type: TC
Location: 4710 - 5579 (-)
Type: TC
Location: 4710 - 5579 (-)
Gene ID: Rep_3208_c_75_6
Type: TC
Location: 5608 - 6807 (-)
Type: TC
Location: 5608 - 6807 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp902373635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3208_c_75_4 | vegetarian > vegan | 1.78598 | 0.02258 |
| Rep_3208_c_75_5 | vegetarian > vegan | 1.32895 | 0.02258 |