Cluster: Rep_3208_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3208_c_49 | Rep_3208_c_49_8 | 5860 | 6861 | + | 2.A.119.1.3 |
| pfam | Rep_3208_c_49 | Rep_3208_c_49_9 | 6882 | 7226 | + | Thioredoxin_3 |
| pfam | Rep_3208_c_49 | Rep_3208_c_49_10 | 7475 | 8602 | + | DUF5677 |
| CAZyme | Rep_3208_c_49 | Rep_3208_c_49_11 | 8868 | 11327 | - | SLH |
| TC | Rep_3208_c_49 | Rep_3208_c_49_12 | 11740 | 19092 | - | 8.A.43.1.3 |
Gene ID: Rep_3208_c_49_8
Type: TC
Location: 5860 - 6861 (+)
Type: TC
Location: 5860 - 6861 (+)
Gene ID: Rep_3208_c_49_9
Type: pfam
Location: 6882 - 7226 (+)
Type: pfam
Location: 6882 - 7226 (+)
Gene ID: Rep_3208_c_49_10
Type: pfam
Location: 7475 - 8602 (+)
Type: pfam
Location: 7475 - 8602 (+)
Gene ID: Rep_3208_c_49_11
Type: CAZyme
Location: 8868 - 11327 (-)
Type: CAZyme
Location: 8868 - 11327 (-)
Gene ID: Rep_3208_c_49_12
Type: TC
Location: 11740 - 19092 (-)
Type: TC
Location: 11740 - 19092 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp902373635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3208_c_49_9 | vegetarian > vegan | 1.07501 | 0.02258 |