Cluster: Rep_3208_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3208_c_31 | Rep_3208_c_31_16 | 14993 | 15721 | - | 9.B.20.1.3 |
| TC | Rep_3208_c_31 | Rep_3208_c_31_17 | 15735 | 17192 | - | 2.A.37.3.3 |
| TF | Rep_3208_c_31 | Rep_3208_c_31_18 | 17313 | 18212 | + | HTH_1 |
| TF | Rep_3208_c_31 | Rep_3208_c_31_19 | 18372 | 19262 | - | HTH_3 |
| TC | Rep_3208_c_31 | Rep_3208_c_31_20 | 19461 | 20930 | + | 2.A.66.1.37 |
| CAZyme | Rep_3208_c_31 | Rep_3208_c_31_21 | 21046 | 23112 | + | GH24 | GH25 |
Gene ID: Rep_3208_c_31_16
Type: TC
Location: 14993 - 15721 (-)
Type: TC
Location: 14993 - 15721 (-)
Gene ID: Rep_3208_c_31_17
Type: TC
Location: 15735 - 17192 (-)
Type: TC
Location: 15735 - 17192 (-)
Gene ID: Rep_3208_c_31_18
Type: TF
Location: 17313 - 18212 (+)
Type: TF
Location: 17313 - 18212 (+)
Gene ID: Rep_3208_c_31_19
Type: TF
Location: 18372 - 19262 (-)
Type: TF
Location: 18372 - 19262 (-)
Gene ID: Rep_3208_c_31_20
Type: TC
Location: 19461 - 20930 (+)
Type: TC
Location: 19461 - 20930 (+)
Gene ID: Rep_3208_c_31_21
Type: CAZyme
Location: 21046 - 23112 (+)
Type: CAZyme
Location: 21046 - 23112 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp902373635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.