Cluster: Rep_3208_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3208_c_28 | Rep_3208_c_28_8 | 5183 | 6523 | + | 2.A.3.8.12 |
| CAZyme | Rep_3208_c_28 | Rep_3208_c_28_9 | 6792 | 7901 | - | CE9 |
| pfam | Rep_3208_c_28 | Rep_3208_c_28_10 | 7915 | 9297 | - | ROK |
| pfam | Rep_3208_c_28 | Rep_3208_c_28_11 | 9521 | 10723 | + | GlcNAc_2-epim |
| TC | Rep_3208_c_28 | Rep_3208_c_28_12 | 10780 | 12132 | - | 2.A.66.1.33 |
Gene ID: Rep_3208_c_28_8
Type: TC
Location: 5183 - 6523 (+)
Type: TC
Location: 5183 - 6523 (+)
Gene ID: Rep_3208_c_28_9
Type: CAZyme
Location: 6792 - 7901 (-)
Type: CAZyme
Location: 6792 - 7901 (-)
Gene ID: Rep_3208_c_28_10
Type: pfam
Location: 7915 - 9297 (-)
Type: pfam
Location: 7915 - 9297 (-)
Gene ID: Rep_3208_c_28_11
Type: pfam
Location: 9521 - 10723 (+)
Type: pfam
Location: 9521 - 10723 (+)
Gene ID: Rep_3208_c_28_12
Type: TC
Location: 10780 - 12132 (-)
Type: TC
Location: 10780 - 12132 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp902373635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.