Cluster: Rep_3208_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3208_c_21 | Rep_3208_c_21_24 | 25511 | 27589 | + | CBM48 | GH13_9 |
| pfam | Rep_3208_c_21 | Rep_3208_c_21_25 | 27622 | 28830 | + | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_3208_c_21 | Rep_3208_c_21_26 | 28827 | 29942 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_3208_c_21 | Rep_3208_c_21_27 | 30080 | 31513 | + | GT5 |
| CAZyme | Rep_3208_c_21 | Rep_3208_c_21_28 | 31597 | 34026 | + | GT35 |
| TC | Rep_3208_c_21 | Rep_3208_c_21_29 | 34210 | 35373 | + | 3.A.18.1.1 |
| TC | Rep_3208_c_21 | Rep_3208_c_21_30 | 35403 | 37208 | + | 3.A.1.5.2 |
Gene ID: Rep_3208_c_21_24
Type: CAZyme
Location: 25511 - 27589 (+)
Type: CAZyme
Location: 25511 - 27589 (+)
Gene ID: Rep_3208_c_21_25
Type: pfam
Location: 27622 - 28830 (+)
Type: pfam
Location: 27622 - 28830 (+)
Gene ID: Rep_3208_c_21_26
Type: pfam
Location: 28827 - 29942 (+)
Type: pfam
Location: 28827 - 29942 (+)
Gene ID: Rep_3208_c_21_27
Type: CAZyme
Location: 30080 - 31513 (+)
Type: CAZyme
Location: 30080 - 31513 (+)
Gene ID: Rep_3208_c_21_28
Type: CAZyme
Location: 31597 - 34026 (+)
Type: CAZyme
Location: 31597 - 34026 (+)
Gene ID: Rep_3208_c_21_29
Type: TC
Location: 34210 - 35373 (+)
Type: TC
Location: 34210 - 35373 (+)
Gene ID: Rep_3208_c_21_30
Type: TC
Location: 35403 - 37208 (+)
Type: TC
Location: 35403 - 37208 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp902373635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.