Cluster: Rep_3208_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3208_c_12 | Rep_3208_c_12_41 | 48304 | 49155 | - | 4.A.6.1.17 |
| TC | Rep_3208_c_12 | Rep_3208_c_12_42 | 49158 | 49904 | - | 4.A.6.1.17 |
| TC | Rep_3208_c_12 | Rep_3208_c_12_43 | 49932 | 50402 | - | 4.A.6.1.9 |
| TC | Rep_3208_c_12 | Rep_3208_c_12_44 | 50399 | 50827 | - | 4.A.6.1.21 |
| TF | Rep_3208_c_12 | Rep_3208_c_12_45 | 51142 | 53577 | + | TrmB |
| pfam | Rep_3208_c_12 | Rep_3208_c_12_46 | 54109 | 54501 | + | DUF1093 |
| CAZyme | Rep_3208_c_12 | Rep_3208_c_12_47 | 54513 | 55196 | + | GT51 |
Gene ID: Rep_3208_c_12_41
Type: TC
Location: 48304 - 49155 (-)
Type: TC
Location: 48304 - 49155 (-)
Gene ID: Rep_3208_c_12_42
Type: TC
Location: 49158 - 49904 (-)
Type: TC
Location: 49158 - 49904 (-)
Gene ID: Rep_3208_c_12_43
Type: TC
Location: 49932 - 50402 (-)
Type: TC
Location: 49932 - 50402 (-)
Gene ID: Rep_3208_c_12_44
Type: TC
Location: 50399 - 50827 (-)
Type: TC
Location: 50399 - 50827 (-)
Gene ID: Rep_3208_c_12_45
Type: TF
Location: 51142 - 53577 (+)
Type: TF
Location: 51142 - 53577 (+)
Gene ID: Rep_3208_c_12_46
Type: pfam
Location: 54109 - 54501 (+)
Type: pfam
Location: 54109 - 54501 (+)
Gene ID: Rep_3208_c_12_47
Type: CAZyme
Location: 54513 - 55196 (+)
Type: CAZyme
Location: 54513 - 55196 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp902373635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.