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Cluster: Rep_3191_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3191_c_0 Rep_3191_c_0_599 647252 647920 + 3.A.1.3.28
TC Rep_3191_c_0 Rep_3191_c_0_600 647923 648693 + 3.A.1.3.13
TC Rep_3191_c_0 Rep_3191_c_0_601 648690 649487 + 3.A.1.3.28
CAZyme Rep_3191_c_0 Rep_3191_c_0_602 650119 651636 + GH25
TF Rep_3191_c_0 Rep_3191_c_0_603 652008 652466 + 0040517
TC Rep_3191_c_0 Rep_3191_c_0_604 652463 653803 + 2.A.66.1.37
pfam Rep_3191_c_0 Rep_3191_c_0_605 653986 655734 - tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1
TC Rep_3191_c_0 Rep_3191_c_0_606 655747 657351 - 3.A.1.121.4
STP Rep_3191_c_0 Rep_3191_c_0_607 657693 659582 + HATPase_c
TC Rep_3191_c_0 Rep_3191_c_0_608 659638 660717 - 9.B.34.1.2
STP Rep_3191_c_0 Rep_3191_c_0_609 660914 661132 + HMA
TC Rep_3191_c_0 Rep_3191_c_0_610 661311 663218 + 3.A.3.6.10
Gene ID: Rep_3191_c_0_599
Type: TC
Location: 647252 - 647920 (+)
Gene ID: Rep_3191_c_0_600
Type: TC
Location: 647923 - 648693 (+)
Gene ID: Rep_3191_c_0_601
Type: TC
Location: 648690 - 649487 (+)
Gene ID: Rep_3191_c_0_602
Type: CAZyme
Location: 650119 - 651636 (+)
Gene ID: Rep_3191_c_0_603
Type: TF
Location: 652008 - 652466 (+)
Gene ID: Rep_3191_c_0_604
Type: TC
Location: 652463 - 653803 (+)
Gene ID: Rep_3191_c_0_605
Type: pfam
Location: 653986 - 655734 (-)
Gene ID: Rep_3191_c_0_606
Type: TC
Location: 655747 - 657351 (-)
Gene ID: Rep_3191_c_0_607
Type: STP
Location: 657693 - 659582 (+)
Gene ID: Rep_3191_c_0_608
Type: TC
Location: 659638 - 660717 (-)
Gene ID: Rep_3191_c_0_609
Type: STP
Location: 660914 - 661132 (+)
Gene ID: Rep_3191_c_0_610
Type: TC
Location: 661311 - 663218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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