Cluster: Rep_3191_CGC29
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3191
- CGC Family ID: CGCFAM_00877
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3191_c_1 | Rep_3191_c_1_221 | 244609 | 245739 | - | GT4 |
| pfam | Rep_3191_c_1 | Rep_3191_c_1_222 | 245781 | 247169 | - | Polysacc_synt |
| CAZyme | Rep_3191_c_1 | Rep_3191_c_1_223 | 247179 | 248438 | - | GT4 |
| pfam | Rep_3191_c_1 | Rep_3191_c_1_224 | 248443 | 249603 | - | Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4 |
| NULL(UNKNOWN) | Rep_3191_c_1 | Rep_3191_c_1_225 | 249625 | 250893 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3191_c_1 | Rep_3191_c_1_226 | 250890 | 251993 | - | GT4 |
| CAZyme | Rep_3191_c_1 | Rep_3191_c_1_227 | 251990 | 253216 | - | GT4 |
| pfam | Rep_3191_c_1 | Rep_3191_c_1_228 | 253241 | 254113 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | Rep_3191_c_1 | Rep_3191_c_1_229 | 254110 | 254724 | - | 9.B.18.1.1 |
| pfam | Rep_3191_c_1 | Rep_3191_c_1_230 | 254892 | 255986 | - | APH |
| pfam | Rep_3191_c_1 | Rep_3191_c_1_231 | 256382 | 259951 | + | SMC_N | SMC_hinge | AAA_23 |
| TC | Rep_3191_c_1 | Rep_3191_c_1_232 | 259970 | 260878 | + | 3.A.5.1.1 |
Gene ID: Rep_3191_c_1_221
Type: CAZyme
Location: 244609 - 245739 (-)
Type: CAZyme
Location: 244609 - 245739 (-)
Gene ID: Rep_3191_c_1_222
Type: pfam
Location: 245781 - 247169 (-)
Type: pfam
Location: 245781 - 247169 (-)
Gene ID: Rep_3191_c_1_223
Type: CAZyme
Location: 247179 - 248438 (-)
Type: CAZyme
Location: 247179 - 248438 (-)
Gene ID: Rep_3191_c_1_224
Type: pfam
Location: 248443 - 249603 (-)
Type: pfam
Location: 248443 - 249603 (-)
Gene ID: Rep_3191_c_1_225
Type:
Location: 249625 - 250893 (-)
Type:
Location: 249625 - 250893 (-)
Gene ID: Rep_3191_c_1_226
Type: CAZyme
Location: 250890 - 251993 (-)
Type: CAZyme
Location: 250890 - 251993 (-)
Gene ID: Rep_3191_c_1_227
Type: CAZyme
Location: 251990 - 253216 (-)
Type: CAZyme
Location: 251990 - 253216 (-)
Gene ID: Rep_3191_c_1_228
Type: pfam
Location: 253241 - 254113 (-)
Type: pfam
Location: 253241 - 254113 (-)
Gene ID: Rep_3191_c_1_229
Type: TC
Location: 254110 - 254724 (-)
Type: TC
Location: 254110 - 254724 (-)
Gene ID: Rep_3191_c_1_230
Type: pfam
Location: 254892 - 255986 (-)
Type: pfam
Location: 254892 - 255986 (-)
Gene ID: Rep_3191_c_1_231
Type: pfam
Location: 256382 - 259951 (+)
Type: pfam
Location: 256382 - 259951 (+)
Gene ID: Rep_3191_c_1_232
Type: TC
Location: 259970 - 260878 (+)
Type: TC
Location: 259970 - 260878 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900540635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3191_c_1_229 | vegetarian > omnivore | 1.04691 | 0.00861 |