Cluster: Rep_3191_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3191
- CGC Family ID: CGCFAM_00088
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3191_c_0 | Rep_3191_c_0_1561 | 1707243 | 1707602 | + | 1.E.14.1.17 |
| TC | Rep_3191_c_0 | Rep_3191_c_0_1562 | 1707595 | 1708287 | + | 2.A.122.1.4 |
| CAZyme | Rep_3191_c_0 | Rep_3191_c_0_1563 | 1708317 | 1709789 | + | GH77 |
| TC | Rep_3191_c_0 | Rep_3191_c_0_1564 | 1710027 | 1711385 | + | 3.A.1.1.45 |
| TC | Rep_3191_c_0 | Rep_3191_c_0_1565 | 1711542 | 1712441 | + | 3.A.1.1.45 |
| TC | Rep_3191_c_0 | Rep_3191_c_0_1566 | 1712441 | 1713304 | + | 3.A.1.1.45 |
Gene ID: Rep_3191_c_0_1561
Type: TC
Location: 1707243 - 1707602 (+)
Type: TC
Location: 1707243 - 1707602 (+)
Gene ID: Rep_3191_c_0_1562
Type: TC
Location: 1707595 - 1708287 (+)
Type: TC
Location: 1707595 - 1708287 (+)
Gene ID: Rep_3191_c_0_1563
Type: CAZyme
Location: 1708317 - 1709789 (+)
Type: CAZyme
Location: 1708317 - 1709789 (+)
Gene ID: Rep_3191_c_0_1564
Type: TC
Location: 1710027 - 1711385 (+)
Type: TC
Location: 1710027 - 1711385 (+)
Gene ID: Rep_3191_c_0_1565
Type: TC
Location: 1711542 - 1712441 (+)
Type: TC
Location: 1711542 - 1712441 (+)
Gene ID: Rep_3191_c_0_1566
Type: TC
Location: 1712441 - 1713304 (+)
Type: TC
Location: 1712441 - 1713304 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900540635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3191_c_0_1564 | vegetarian > vegan | 1.19155 | 0.00364 |