Cluster: Rep_3191_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3191
- CGC Family ID: CGCFAM_00132
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3191_c_0 | Rep_3191_c_0_176 | 179752 | 180798 | - | 9.B.18.2.1 |
| pfam | Rep_3191_c_0 | Rep_3191_c_0_177 | 180801 | 182213 | - | Polysacc_synt | Polysacc_synt_3 |
| pfam | Rep_3191_c_0 | Rep_3191_c_0_178 | 182210 | 183319 | - | PS_pyruv_trans |
| CAZyme | Rep_3191_c_0 | Rep_3191_c_0_179 | 183316 | 184503 | - | GT4 |
| pfam | Rep_3191_c_0 | Rep_3191_c_0_180 | 184513 | 185688 | - | Wzy_C |
| CAZyme | Rep_3191_c_0 | Rep_3191_c_0_181 | 185728 | 186888 | - | GT4 |
| CAZyme | Rep_3191_c_0 | Rep_3191_c_0_182 | 186906 | 187997 | - | GT4 |
| CAZyme | Rep_3191_c_0 | Rep_3191_c_0_183 | 187994 | 189205 | - | GT4 |
| pfam | Rep_3191_c_0 | Rep_3191_c_0_184 | 189230 | 190288 | - | PS_pyruv_trans |
| TC | Rep_3191_c_0 | Rep_3191_c_0_185 | 190383 | 191762 | - | 9.B.18.1.3 |
| TF | Rep_3191_c_0 | Rep_3191_c_0_186 | 191941 | 192753 | - | HTH_3 |
| STP | Rep_3191_c_0 | Rep_3191_c_0_187 | 192998 | 194356 | + | TrkA_C | TrkA_C |
| TC | Rep_3191_c_0 | Rep_3191_c_0_188 | 194367 | 195827 | + | 2.A.38.1.1 |
Gene ID: Rep_3191_c_0_176
Type: TC
Location: 179752 - 180798 (-)
Type: TC
Location: 179752 - 180798 (-)
Gene ID: Rep_3191_c_0_177
Type: pfam
Location: 180801 - 182213 (-)
Type: pfam
Location: 180801 - 182213 (-)
Gene ID: Rep_3191_c_0_178
Type: pfam
Location: 182210 - 183319 (-)
Type: pfam
Location: 182210 - 183319 (-)
Gene ID: Rep_3191_c_0_179
Type: CAZyme
Location: 183316 - 184503 (-)
Type: CAZyme
Location: 183316 - 184503 (-)
Gene ID: Rep_3191_c_0_180
Type: pfam
Location: 184513 - 185688 (-)
Type: pfam
Location: 184513 - 185688 (-)
Gene ID: Rep_3191_c_0_181
Type: CAZyme
Location: 185728 - 186888 (-)
Type: CAZyme
Location: 185728 - 186888 (-)
Gene ID: Rep_3191_c_0_182
Type: CAZyme
Location: 186906 - 187997 (-)
Type: CAZyme
Location: 186906 - 187997 (-)
Gene ID: Rep_3191_c_0_183
Type: CAZyme
Location: 187994 - 189205 (-)
Type: CAZyme
Location: 187994 - 189205 (-)
Gene ID: Rep_3191_c_0_184
Type: pfam
Location: 189230 - 190288 (-)
Type: pfam
Location: 189230 - 190288 (-)
Gene ID: Rep_3191_c_0_185
Type: TC
Location: 190383 - 191762 (-)
Type: TC
Location: 190383 - 191762 (-)
Gene ID: Rep_3191_c_0_186
Type: TF
Location: 191941 - 192753 (-)
Type: TF
Location: 191941 - 192753 (-)
Gene ID: Rep_3191_c_0_187
Type: STP
Location: 192998 - 194356 (+)
Type: STP
Location: 192998 - 194356 (+)
Gene ID: Rep_3191_c_0_188
Type: TC
Location: 194367 - 195827 (+)
Type: TC
Location: 194367 - 195827 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900540635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.