Cluster: Rep_3191_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3191
- CGC Family ID: CGCFAM_06672
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3191_c_0 | Rep_3191_c_0_1325 | 1465401 | 1467806 | + | GH31_3 |
| STP | Rep_3191_c_0 | Rep_3191_c_0_1326 | 1467971 | 1469503 | + | SBP_bac_1 |
| TC | Rep_3191_c_0 | Rep_3191_c_0_1327 | 1469538 | 1470473 | + | 3.A.1.1.21 |
| TC | Rep_3191_c_0 | Rep_3191_c_0_1328 | 1470486 | 1471364 | + | 3.A.1.1.29 |
| pfam | Rep_3191_c_0 | Rep_3191_c_0_1329 | 1471369 | 1472991 | + | His_kinase |
| TF | Rep_3191_c_0 | Rep_3191_c_0_1330 | 1473002 | 1474594 | + | HTH_AraC | HTH_AraC |
| TC | Rep_3191_c_0 | Rep_3191_c_0_1331 | 1474597 | 1475559 | + | 8.A.5.1.4 |
Gene ID: Rep_3191_c_0_1325
Type: CAZyme
Location: 1465401 - 1467806 (+)
Type: CAZyme
Location: 1465401 - 1467806 (+)
Gene ID: Rep_3191_c_0_1326
Type: STP
Location: 1467971 - 1469503 (+)
Type: STP
Location: 1467971 - 1469503 (+)
Gene ID: Rep_3191_c_0_1327
Type: TC
Location: 1469538 - 1470473 (+)
Type: TC
Location: 1469538 - 1470473 (+)
Gene ID: Rep_3191_c_0_1328
Type: TC
Location: 1470486 - 1471364 (+)
Type: TC
Location: 1470486 - 1471364 (+)
Gene ID: Rep_3191_c_0_1329
Type: pfam
Location: 1471369 - 1472991 (+)
Type: pfam
Location: 1471369 - 1472991 (+)
Gene ID: Rep_3191_c_0_1330
Type: TF
Location: 1473002 - 1474594 (+)
Type: TF
Location: 1473002 - 1474594 (+)
Gene ID: Rep_3191_c_0_1331
Type: TC
Location: 1474597 - 1475559 (+)
Type: TC
Location: 1474597 - 1475559 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900540635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.