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Cluster: Rep_3191_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3191_c_0 Rep_3191_c_0_1295 1432734 1435502 - 3.A.5.1.3
pfam Rep_3191_c_0 Rep_3191_c_0_1296 1435911 1437080 - tRNA-synt_2c | tRNA_SAD
pfam Rep_3191_c_0 Rep_3191_c_0_1297 1437284 1438060 + Zn_dep_PLPC
TC Rep_3191_c_0 Rep_3191_c_0_1298 1438075 1439361 + 2.A.1.24.4
CAZyme Rep_3191_c_0 Rep_3191_c_0_1299 1439497 1440618 + GT4
pfam Rep_3191_c_0 Rep_3191_c_0_1300 1440621 1441295 + Hexapep
pfam Rep_3191_c_0 Rep_3191_c_0_1301 1441383 1442150 + Ni_insertion
TC Rep_3191_c_0 Rep_3191_c_0_1302 1442361 1444400 - 9.A.8.1.5
Gene ID: Rep_3191_c_0_1295
Type: TC
Location: 1432734 - 1435502 (-)
Gene ID: Rep_3191_c_0_1296
Type: pfam
Location: 1435911 - 1437080 (-)
Gene ID: Rep_3191_c_0_1297
Type: pfam
Location: 1437284 - 1438060 (+)
Gene ID: Rep_3191_c_0_1298
Type: TC
Location: 1438075 - 1439361 (+)
Gene ID: Rep_3191_c_0_1299
Type: CAZyme
Location: 1439497 - 1440618 (+)
Gene ID: Rep_3191_c_0_1300
Type: pfam
Location: 1440621 - 1441295 (+)
Gene ID: Rep_3191_c_0_1301
Type: pfam
Location: 1441383 - 1442150 (+)
Gene ID: Rep_3191_c_0_1302
Type: TC
Location: 1442361 - 1444400 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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