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Cluster: Rep_3191_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3191_c_0 Rep_3191_c_0_1024 1132524 1133873 - GH1
CAZyme Rep_3191_c_0 Rep_3191_c_0_1025 1133870 1136308 - GH94
TF Rep_3191_c_0 Rep_3191_c_0_1026 1136673 1137680 + LacI
NULL(UNKNOWN) Rep_3191_c_0 Rep_3191_c_0_1027 1137744 1139105 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3191_c_0 Rep_3191_c_0_1028 1139453 1140400 + 3.A.1.1.4
TC Rep_3191_c_0 Rep_3191_c_0_1029 1140413 1141282 + 3.A.1.1.26
pfam Rep_3191_c_0 Rep_3191_c_0_1030 1141333 1142238 - Patatin | DUF6363
pfam Rep_3191_c_0 Rep_3191_c_0_1031 1142543 1143562 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | GDP_Man_Dehyd
TC Rep_3191_c_0 Rep_3191_c_0_1032 1143691 1144476 - 3.A.1.34.1
TC Rep_3191_c_0 Rep_3191_c_0_1033 1144478 1145350 - 3.A.1.34.1
Gene ID: Rep_3191_c_0_1024
Type: CAZyme
Location: 1132524 - 1133873 (-)
Gene ID: Rep_3191_c_0_1025
Type: CAZyme
Location: 1133870 - 1136308 (-)
Gene ID: Rep_3191_c_0_1026
Type: TF
Location: 1136673 - 1137680 (+)
Gene ID: Rep_3191_c_0_1027
Type:
Location: 1137744 - 1139105 (+)
Gene ID: Rep_3191_c_0_1028
Type: TC
Location: 1139453 - 1140400 (+)
Gene ID: Rep_3191_c_0_1029
Type: TC
Location: 1140413 - 1141282 (+)
Gene ID: Rep_3191_c_0_1030
Type: pfam
Location: 1141333 - 1142238 (-)
Gene ID: Rep_3191_c_0_1031
Type: pfam
Location: 1142543 - 1143562 (-)
Gene ID: Rep_3191_c_0_1032
Type: TC
Location: 1143691 - 1144476 (-)
Gene ID: Rep_3191_c_0_1033
Type: TC
Location: 1144478 - 1145350 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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