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Cluster: Rep_3191_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3191_c_0 Rep_3191_c_0_773 857532 858323 - GT8
TC Rep_3191_c_0 Rep_3191_c_0_774 858320 860134 - 3.A.16.1.1
pfam Rep_3191_c_0 Rep_3191_c_0_775 860156 860902 - ABC_trans_CmpB
TC Rep_3191_c_0 Rep_3191_c_0_776 861077 862105 + 3.A.1.121.4
NULL(UNKNOWN) Rep_3191_c_0 Rep_3191_c_0_777 862196 862786 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_3191_c_0 Rep_3191_c_0_778 862828 862965 - FeoB_associated
TC Rep_3191_c_0 Rep_3191_c_0_779 862970 865327 - 9.A.8.1.6
Gene ID: Rep_3191_c_0_773
Type: CAZyme
Location: 857532 - 858323 (-)
Gene ID: Rep_3191_c_0_774
Type: TC
Location: 858320 - 860134 (-)
Gene ID: Rep_3191_c_0_775
Type: pfam
Location: 860156 - 860902 (-)
Gene ID: Rep_3191_c_0_776
Type: TC
Location: 861077 - 862105 (+)
Gene ID: Rep_3191_c_0_777
Type:
Location: 862196 - 862786 (+)
Gene ID: Rep_3191_c_0_778
Type: pfam
Location: 862828 - 862965 (-)
Gene ID: Rep_3191_c_0_779
Type: TC
Location: 862970 - 865327 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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