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Cluster: Rep_317_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_317_c_39 Rep_317_c_39_2 1381 2403 - GT2
CAZyme Rep_317_c_39 Rep_317_c_39_3 2556 3542 - GT2
pfam Rep_317_c_39 Rep_317_c_39_4 3539 4744 - Glycos_transf_1 | Glyco_trans_1_4
CAZyme Rep_317_c_39 Rep_317_c_39_5 4756 5691 - GT2
pfam Rep_317_c_39 Rep_317_c_39_6 5697 6839 - GldN
TC Rep_317_c_39 Rep_317_c_39_7 6854 8422 - 9.A.25.1.1
pfam Rep_317_c_39 Rep_317_c_39_8 8426 9361 - GldL_N
TC Rep_317_c_39 Rep_317_c_39_9 9365 10858 - 9.A.25.1.1
pfam Rep_317_c_39 Rep_317_c_39_10 10864 11874 - PorP_SprF
TC Rep_317_c_39 Rep_317_c_39_11 11871 12029 - 1.B.44.1.1
Gene ID: Rep_317_c_39_2
Type: CAZyme
Location: 1381 - 2403 (-)
Gene ID: Rep_317_c_39_3
Type: CAZyme
Location: 2556 - 3542 (-)
Gene ID: Rep_317_c_39_4
Type: pfam
Location: 3539 - 4744 (-)
Gene ID: Rep_317_c_39_5
Type: CAZyme
Location: 4756 - 5691 (-)
Gene ID: Rep_317_c_39_6
Type: pfam
Location: 5697 - 6839 (-)
Gene ID: Rep_317_c_39_7
Type: TC
Location: 6854 - 8422 (-)
Gene ID: Rep_317_c_39_8
Type: pfam
Location: 8426 - 9361 (-)
Gene ID: Rep_317_c_39_9
Type: TC
Location: 9365 - 10858 (-)
Gene ID: Rep_317_c_39_10
Type: pfam
Location: 10864 - 11874 (-)
Gene ID: Rep_317_c_39_11
Type: TC
Location: 11871 - 12029 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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