Cluster: Rep_317_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_317
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_317_c_21 | Rep_317_c_21_2 | 1292 | 2725 | + | GH13_28 |
| pfam | Rep_317_c_21 | Rep_317_c_21_3 | 2912 | 3184 | + | Cpn10 |
| pfam | Rep_317_c_21 | Rep_317_c_21_4 | 3230 | 4867 | + | Cpn60_TCP1 |
| TC | Rep_317_c_21 | Rep_317_c_21_5 | 5035 | 6987 | + | 3.A.1.121.4 |
| peptidase | Rep_317_c_21 | Rep_317_c_21_6 | 7024 | 8982 | + | M13.UPW |
| pfam | Rep_317_c_21 | Rep_317_c_21_7 | 9003 | 9746 | + | Shikimate_dh_N |
| TC | Rep_317_c_21 | Rep_317_c_21_8 | 9743 | 11695 | + | 3.A.11.1.1 |
Gene ID: Rep_317_c_21_2
Type: CAZyme
Location: 1292 - 2725 (+)
Type: CAZyme
Location: 1292 - 2725 (+)
Gene ID: Rep_317_c_21_3
Type: pfam
Location: 2912 - 3184 (+)
Type: pfam
Location: 2912 - 3184 (+)
Gene ID: Rep_317_c_21_4
Type: pfam
Location: 3230 - 4867 (+)
Type: pfam
Location: 3230 - 4867 (+)
Gene ID: Rep_317_c_21_5
Type: TC
Location: 5035 - 6987 (+)
Type: TC
Location: 5035 - 6987 (+)
Gene ID: Rep_317_c_21_6
Type: peptidase
Location: 7024 - 8982 (+)
Type: peptidase
Location: 7024 - 8982 (+)
Gene ID: Rep_317_c_21_7
Type: pfam
Location: 9003 - 9746 (+)
Type: pfam
Location: 9003 - 9746 (+)
Gene ID: Rep_317_c_21_8
Type: TC
Location: 9743 - 11695 (+)
Type: TC
Location: 9743 - 11695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_317_c_21_3 | vegan > omnivore | 1.13934 | 0.04449 |