Cluster: Rep_317_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: Rep_317
- CGC Family ID: CGCFAM_00001
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_317_c_118 | Rep_317_c_118_1 | 178 | 2499 | - | GH3 |
| CAZyme | Rep_317_c_118 | Rep_317_c_118_2 | 2531 | 3814 | - | GH5_46 |
| NULL(UNKNOWN) | Rep_317_c_118 | Rep_317_c_118_3 | 3994 | 5937 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_317_c_118 | Rep_317_c_118_4 | 5967 | 7490 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_317_c_118 | Rep_317_c_118_5 | 7524 | 10706 | - | 1.B.14.6.1 |
| CAZyme | Rep_317_c_118 | Rep_317_c_118_6 | 10853 | 12232 | - | GH16_3 |
Gene ID: Rep_317_c_118_1
Type: CAZyme
Location: 178 - 2499 (-)
Type: CAZyme
Location: 178 - 2499 (-)
Gene ID: Rep_317_c_118_2
Type: CAZyme
Location: 2531 - 3814 (-)
Type: CAZyme
Location: 2531 - 3814 (-)
Gene ID: Rep_317_c_118_3
Type:
Location: 3994 - 5937 (-)
Type:
Location: 3994 - 5937 (-)
Gene ID: Rep_317_c_118_4
Type: pfam
Location: 5967 - 7490 (-)
Type: pfam
Location: 5967 - 7490 (-)
Gene ID: Rep_317_c_118_5
Type: TC
Location: 7524 - 10706 (-)
Type: TC
Location: 7524 - 10706 (-)
Gene ID: Rep_317_c_118_6
Type: CAZyme
Location: 10853 - 12232 (-)
Type: CAZyme
Location: 10853 - 12232 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.