Cluster: Rep_317_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_317
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_317_c_108 | Rep_317_c_108_28 | 36912 | 37871 | + | 1.A.3.1.2 |
| TC | Rep_317_c_108 | Rep_317_c_108_29 | 37882 | 39195 | + | 9.A.25.1.1 |
| NULL(UNKNOWN) | Rep_317_c_108 | Rep_317_c_108_30 | 39212 | 39850 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_317_c_108 | Rep_317_c_108_31 | 39948 | 42224 | + | GH20 |
| TC | Rep_317_c_108 | Rep_317_c_108_32 | 42250 | 44064 | - | 3.A.24.1.1 |
Gene ID: Rep_317_c_108_28
Type: TC
Location: 36912 - 37871 (+)
Type: TC
Location: 36912 - 37871 (+)
Gene ID: Rep_317_c_108_29
Type: TC
Location: 37882 - 39195 (+)
Type: TC
Location: 37882 - 39195 (+)
Gene ID: Rep_317_c_108_30
Type:
Location: 39212 - 39850 (+)
Type:
Location: 39212 - 39850 (+)
Gene ID: Rep_317_c_108_31
Type: CAZyme
Location: 39948 - 42224 (+)
Type: CAZyme
Location: 39948 - 42224 (+)
Gene ID: Rep_317_c_108_32
Type: TC
Location: 42250 - 44064 (-)
Type: TC
Location: 42250 - 44064 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.