dbCAN Logo

Cluster: Rep_317_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_317_c_96 Rep_317_c_96_16 20642 22894 + 1.B.14.8.7
NULL(UNKNOWN) Rep_317_c_96 Rep_317_c_96_17 22919 23920 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_317_c_96 Rep_317_c_96_18 24107 24478 + 3.D.1.8.1
TC Rep_317_c_96 Rep_317_c_96_19 24469 25083 + 3.D.1.6.1
TC Rep_317_c_96 Rep_317_c_96_20 25124 26752 + 3.D.1.5.1
TC Rep_317_c_96 Rep_317_c_96_21 26816 27895 + 3.D.1.5.1
TC Rep_317_c_96 Rep_317_c_96_22 27929 29431 + 3.A.2.1.2
pfam Rep_317_c_96 Rep_317_c_96_23 29453 29689 + ATP-synt_DE_N
pfam Rep_317_c_96 Rep_317_c_96_24 29701 31050 + ATP-synt_A
TC Rep_317_c_96 Rep_317_c_96_25 31100 31354 + 3.A.2.1.6
pfam Rep_317_c_96 Rep_317_c_96_26 31434 31928 + ATP-synt_B | YMF19
pfam Rep_317_c_96 Rep_317_c_96_27 31936 32481 + OSCP
TC Rep_317_c_96 Rep_317_c_96_28 32486 34066 + 3.A.2.1.3
TC Rep_317_c_96 Rep_317_c_96_29 34141 35031 + 3.A.2.1.1
STP Rep_317_c_96 Rep_317_c_96_30 35070 35699 + Fer4 | Fer4
pfam Rep_317_c_96 Rep_317_c_96_31 35753 36280 + Oxidored_q3
TC Rep_317_c_96 Rep_317_c_96_32 36287 36598 + 3.D.1.2.1
TC Rep_317_c_96 Rep_317_c_96_33 36633 38564 + 3.D.9.1.1
TC Rep_317_c_96 Rep_317_c_96_34 38600 40114 + 3.D.1.2.1
TC Rep_317_c_96 Rep_317_c_96_35 40148 41596 + 3.D.9.1.1
CAZyme Rep_317_c_96 Rep_317_c_96_36 41848 43812 + GH133
CAZyme Rep_317_c_96 Rep_317_c_96_37 43816 45081 + GT4
CAZyme Rep_317_c_96 Rep_317_c_96_38 45164 46612 + GH57
TC Rep_317_c_96 Rep_317_c_96_39 46697 48139 - 9.B.126.2.2
pfam Rep_317_c_96 Rep_317_c_96_40 48643 49305 - DUF308
TC Rep_317_c_96 Rep_317_c_96_41 49412 50020 - 2.A.115.2.14
Gene ID: Rep_317_c_96_16
Type: TC
Location: 20642 - 22894 (+)
Gene ID: Rep_317_c_96_17
Type:
Location: 22919 - 23920 (+)
Gene ID: Rep_317_c_96_18
Type: TC
Location: 24107 - 24478 (+)
Gene ID: Rep_317_c_96_19
Type: TC
Location: 24469 - 25083 (+)
Gene ID: Rep_317_c_96_20
Type: TC
Location: 25124 - 26752 (+)
Gene ID: Rep_317_c_96_21
Type: TC
Location: 26816 - 27895 (+)
Gene ID: Rep_317_c_96_22
Type: TC
Location: 27929 - 29431 (+)
Gene ID: Rep_317_c_96_23
Type: pfam
Location: 29453 - 29689 (+)
Gene ID: Rep_317_c_96_24
Type: pfam
Location: 29701 - 31050 (+)
Gene ID: Rep_317_c_96_25
Type: TC
Location: 31100 - 31354 (+)
Gene ID: Rep_317_c_96_26
Type: pfam
Location: 31434 - 31928 (+)
Gene ID: Rep_317_c_96_27
Type: pfam
Location: 31936 - 32481 (+)
Gene ID: Rep_317_c_96_28
Type: TC
Location: 32486 - 34066 (+)
Gene ID: Rep_317_c_96_29
Type: TC
Location: 34141 - 35031 (+)
Gene ID: Rep_317_c_96_30
Type: STP
Location: 35070 - 35699 (+)
Gene ID: Rep_317_c_96_31
Type: pfam
Location: 35753 - 36280 (+)
Gene ID: Rep_317_c_96_32
Type: TC
Location: 36287 - 36598 (+)
Gene ID: Rep_317_c_96_33
Type: TC
Location: 36633 - 38564 (+)
Gene ID: Rep_317_c_96_34
Type: TC
Location: 38600 - 40114 (+)
Gene ID: Rep_317_c_96_35
Type: TC
Location: 40148 - 41596 (+)
Gene ID: Rep_317_c_96_36
Type: CAZyme
Location: 41848 - 43812 (+)
Gene ID: Rep_317_c_96_37
Type: CAZyme
Location: 43816 - 45081 (+)
Gene ID: Rep_317_c_96_38
Type: CAZyme
Location: 45164 - 46612 (+)
Gene ID: Rep_317_c_96_39
Type: TC
Location: 46697 - 48139 (-)
Gene ID: Rep_317_c_96_40
Type: pfam
Location: 48643 - 49305 (-)
Gene ID: Rep_317_c_96_41
Type: TC
Location: 49412 - 50020 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List