Cluster: Rep_317_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_317
- CGC Family ID: CGCFAM_00623
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_317_c_1 | Rep_317_c_1_6 | 6191 | 8026 | + | 4.C.1.1.14 |
| pfam | Rep_317_c_1 | Rep_317_c_1_7 | 8054 | 9169 | + | RF-1 | PCRF |
| CAZyme | Rep_317_c_1 | Rep_317_c_1_8 | 9129 | 10193 | - | GT9 |
| pfam | Rep_317_c_1 | Rep_317_c_1_9 | 10180 | 10788 | - | DUF4254 |
| TC | Rep_317_c_1 | Rep_317_c_1_10 | 10930 | 11766 | - | 1.A.30.1.4 |
| NULL(UNKNOWN) | Rep_317_c_1 | Rep_317_c_1_11 | 12124 | 12267 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_317_c_1 | Rep_317_c_1_12 | 12285 | 12800 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_317_c_1 | Rep_317_c_1_13 | 12807 | 13574 | + | 9.B.186.1.3 |
Gene ID: Rep_317_c_1_6
Type: TC
Location: 6191 - 8026 (+)
Type: TC
Location: 6191 - 8026 (+)
Gene ID: Rep_317_c_1_7
Type: pfam
Location: 8054 - 9169 (+)
Type: pfam
Location: 8054 - 9169 (+)
Gene ID: Rep_317_c_1_8
Type: CAZyme
Location: 9129 - 10193 (-)
Type: CAZyme
Location: 9129 - 10193 (-)
Gene ID: Rep_317_c_1_9
Type: pfam
Location: 10180 - 10788 (-)
Type: pfam
Location: 10180 - 10788 (-)
Gene ID: Rep_317_c_1_10
Type: TC
Location: 10930 - 11766 (-)
Type: TC
Location: 10930 - 11766 (-)
Gene ID: Rep_317_c_1_11
Type:
Location: 12124 - 12267 (-)
Type:
Location: 12124 - 12267 (-)
Gene ID: Rep_317_c_1_12
Type:
Location: 12285 - 12800 (+)
Type:
Location: 12285 - 12800 (+)
Gene ID: Rep_317_c_1_13
Type: TC
Location: 12807 - 13574 (+)
Type: TC
Location: 12807 - 13574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.