Cluster: Rep_3179_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3179
- CGC Family ID: CGCFAM_03115
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3179_c_42 | Rep_3179_c_42_133 | 131321 | 133963 | + | 3.A.3.2.21 |
| CAZyme | Rep_3179_c_42 | Rep_3179_c_42_134 | 134019 | 134879 | + | CE4 |
| TC | Rep_3179_c_42 | Rep_3179_c_42_135 | 135009 | 135767 | + | 3.A.1.17.8 |
| TC | Rep_3179_c_42 | Rep_3179_c_42_136 | 135760 | 136575 | + | 3.A.1.17.3 |
Gene ID: Rep_3179_c_42_133
Type: TC
Location: 131321 - 133963 (+)
Type: TC
Location: 131321 - 133963 (+)
Gene ID: Rep_3179_c_42_134
Type: CAZyme
Location: 134019 - 134879 (+)
Type: CAZyme
Location: 134019 - 134879 (+)
Gene ID: Rep_3179_c_42_135
Type: TC
Location: 135009 - 135767 (+)
Type: TC
Location: 135009 - 135767 (+)
Gene ID: Rep_3179_c_42_136
Type: TC
Location: 135760 - 136575 (+)
Type: TC
Location: 135760 - 136575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.