Cluster: Rep_3179_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3179
- CGC Family ID: CGCFAM_02562
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3179_c_28 | Rep_3179_c_28_30 | 40664 | 41653 | + | 2.A.19.5.3 |
| pfam | Rep_3179_c_28 | Rep_3179_c_28_31 | 42045 | 42803 | + | DUF975 |
| pfam | Rep_3179_c_28 | Rep_3179_c_28_32 | 42918 | 44006 | + | NAD_synthase | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M |
| CAZyme | Rep_3179_c_28 | Rep_3179_c_28_33 | 44036 | 44998 | + | GT2 |
Gene ID: Rep_3179_c_28_30
Type: TC
Location: 40664 - 41653 (+)
Type: TC
Location: 40664 - 41653 (+)
Gene ID: Rep_3179_c_28_31
Type: pfam
Location: 42045 - 42803 (+)
Type: pfam
Location: 42045 - 42803 (+)
Gene ID: Rep_3179_c_28_32
Type: pfam
Location: 42918 - 44006 (+)
Type: pfam
Location: 42918 - 44006 (+)
Gene ID: Rep_3179_c_28_33
Type: CAZyme
Location: 44036 - 44998 (+)
Type: CAZyme
Location: 44036 - 44998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.