Cluster: Rep_3179_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3179
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3179_c_25 | Rep_3179_c_25_86 | 69561 | 70769 | - | GH3 |
| TC | Rep_3179_c_25 | Rep_3179_c_25_87 | 70910 | 72034 | + | 9.B.10.1.1 |
| pfam | Rep_3179_c_25 | Rep_3179_c_25_88 | 72027 | 72992 | + | DUF1980_C |
| TC | Rep_3179_c_25 | Rep_3179_c_25_89 | 73051 | 73869 | - | 3.A.1.34.1 |
| TC | Rep_3179_c_25 | Rep_3179_c_25_90 | 73862 | 74794 | - | 3.A.1.34.1 |
| TC | Rep_3179_c_25 | Rep_3179_c_25_91 | 74825 | 75871 | - | 3.A.1.34.1 |
Gene ID: Rep_3179_c_25_86
Type: CAZyme
Location: 69561 - 70769 (-)
Type: CAZyme
Location: 69561 - 70769 (-)
Gene ID: Rep_3179_c_25_87
Type: TC
Location: 70910 - 72034 (+)
Type: TC
Location: 70910 - 72034 (+)
Gene ID: Rep_3179_c_25_88
Type: pfam
Location: 72027 - 72992 (+)
Type: pfam
Location: 72027 - 72992 (+)
Gene ID: Rep_3179_c_25_89
Type: TC
Location: 73051 - 73869 (-)
Type: TC
Location: 73051 - 73869 (-)
Gene ID: Rep_3179_c_25_90
Type: TC
Location: 73862 - 74794 (-)
Type: TC
Location: 73862 - 74794 (-)
Gene ID: Rep_3179_c_25_91
Type: TC
Location: 74825 - 75871 (-)
Type: TC
Location: 74825 - 75871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.