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Cluster: Rep_3179_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3179_c_74 Rep_3179_c_74_26 29340 30107 - 3.A.1.3.14
TC Rep_3179_c_74 Rep_3179_c_74_27 30123 30773 - 3.A.1.3.15
TC Rep_3179_c_74 Rep_3179_c_74_28 30863 31708 - 3.A.1.3.15
STP Rep_3179_c_74 Rep_3179_c_74_29 31931 33808 + Pyr_redox_2
TF Rep_3179_c_74 Rep_3179_c_74_30 34171 34494 + GntR
TC Rep_3179_c_74 Rep_3179_c_74_31 34487 35380 + 3.A.1.126.1
NULL(UNKNOWN) Rep_3179_c_74 Rep_3179_c_74_32 35355 37220 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3179_c_74 Rep_3179_c_74_33 37419 38942 + 9.B.160.1.10
TC Rep_3179_c_74 Rep_3179_c_74_34 39267 40718 - 2.A.22.5.3
STP Rep_3179_c_74 Rep_3179_c_74_35 41162 41716 + Pribosyltran
CAZyme Rep_3179_c_74 Rep_3179_c_74_36 41821 42624 + GT8
Gene ID: Rep_3179_c_74_26
Type: TC
Location: 29340 - 30107 (-)
Gene ID: Rep_3179_c_74_27
Type: TC
Location: 30123 - 30773 (-)
Gene ID: Rep_3179_c_74_28
Type: TC
Location: 30863 - 31708 (-)
Gene ID: Rep_3179_c_74_29
Type: STP
Location: 31931 - 33808 (+)
Gene ID: Rep_3179_c_74_30
Type: TF
Location: 34171 - 34494 (+)
Gene ID: Rep_3179_c_74_31
Type: TC
Location: 34487 - 35380 (+)
Gene ID: Rep_3179_c_74_32
Type:
Location: 35355 - 37220 (+)
Gene ID: Rep_3179_c_74_33
Type: TC
Location: 37419 - 38942 (+)
Gene ID: Rep_3179_c_74_34
Type: TC
Location: 39267 - 40718 (-)
Gene ID: Rep_3179_c_74_35
Type: STP
Location: 41162 - 41716 (+)
Gene ID: Rep_3179_c_74_36
Type: CAZyme
Location: 41821 - 42624 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
CAG-103
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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