Cluster: Rep_3176_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3176
- CGC Family ID: CGCFAM_00245
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3176_c_51 | Rep_3176_c_51_5 | 2202 | 3164 | - | GT2 |
| NULL(UNKNOWN) | Rep_3176_c_51 | Rep_3176_c_51_6 | 3220 | 3462 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3176_c_51 | Rep_3176_c_51_7 | 3522 | 4337 | - | 3.A.1.34.1 |
| TC | Rep_3176_c_51 | Rep_3176_c_51_8 | 4330 | 5280 | - | 3.A.1.34.1 |
| TC | Rep_3176_c_51 | Rep_3176_c_51_9 | 5348 | 6406 | - | 3.A.1.34.1 |
Gene ID: Rep_3176_c_51_5
Type: CAZyme
Location: 2202 - 3164 (-)
Type: CAZyme
Location: 2202 - 3164 (-)
Gene ID: Rep_3176_c_51_6
Type:
Location: 3220 - 3462 (+)
Type:
Location: 3220 - 3462 (+)
Gene ID: Rep_3176_c_51_7
Type: TC
Location: 3522 - 4337 (-)
Type: TC
Location: 3522 - 4337 (-)
Gene ID: Rep_3176_c_51_8
Type: TC
Location: 4330 - 5280 (-)
Type: TC
Location: 4330 - 5280 (-)
Gene ID: Rep_3176_c_51_9
Type: TC
Location: 5348 - 6406 (-)
Type: TC
Location: 5348 - 6406 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp018265835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3176_c_51_9 | vegetarian > omnivore | 1.21934 | 0.00082 |