Cluster: Rep_3176_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3176
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3176_c_48 | Rep_3176_c_48_14 | 12315 | 13568 | + | 2.A.49.9.2 |
| TF | Rep_3176_c_48 | Rep_3176_c_48_15 | 13623 | 13922 | - | HTH_3 |
| pfam | Rep_3176_c_48 | Rep_3176_c_48_16 | 14087 | 15655 | + | DUF6056 |
| CAZyme | Rep_3176_c_48 | Rep_3176_c_48_17 | 15652 | 16608 | + | GT2 |
| NULL(UNKNOWN) | Rep_3176_c_48 | Rep_3176_c_48_18 | 16783 | 17436 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3176_c_48 | Rep_3176_c_48_19 | 17467 | 20091 | + | 3.A.9.1.2 |
Gene ID: Rep_3176_c_48_14
Type: TC
Location: 12315 - 13568 (+)
Type: TC
Location: 12315 - 13568 (+)
Gene ID: Rep_3176_c_48_15
Type: TF
Location: 13623 - 13922 (-)
Type: TF
Location: 13623 - 13922 (-)
Gene ID: Rep_3176_c_48_16
Type: pfam
Location: 14087 - 15655 (+)
Type: pfam
Location: 14087 - 15655 (+)
Gene ID: Rep_3176_c_48_17
Type: CAZyme
Location: 15652 - 16608 (+)
Type: CAZyme
Location: 15652 - 16608 (+)
Gene ID: Rep_3176_c_48_18
Type:
Location: 16783 - 17436 (+)
Type:
Location: 16783 - 17436 (+)
Gene ID: Rep_3176_c_48_19
Type: TC
Location: 17467 - 20091 (+)
Type: TC
Location: 17467 - 20091 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp018265835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3176_c_48_14 | vegetarian > omnivore | 1.32771 | 0.00082 |