Cluster: Rep_3176_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3176
- CGC Family ID: CGCFAM_10245
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3176_c_128 | Rep_3176_c_128_2 | 1103 | 1924 | - | 3.A.1.17.6 |
| TC | Rep_3176_c_128 | Rep_3176_c_128_3 | 1911 | 2669 | - | 3.A.1.16.4 |
| CAZyme | Rep_3176_c_128 | Rep_3176_c_128_4 | 2818 | 3693 | - | CE4 |
| TC | Rep_3176_c_128 | Rep_3176_c_128_5 | 3766 | 6357 | - | 3.A.3.2.21 |
Gene ID: Rep_3176_c_128_2
Type: TC
Location: 1103 - 1924 (-)
Type: TC
Location: 1103 - 1924 (-)
Gene ID: Rep_3176_c_128_3
Type: TC
Location: 1911 - 2669 (-)
Type: TC
Location: 1911 - 2669 (-)
Gene ID: Rep_3176_c_128_4
Type: CAZyme
Location: 2818 - 3693 (-)
Type: CAZyme
Location: 2818 - 3693 (-)
Gene ID: Rep_3176_c_128_5
Type: TC
Location: 3766 - 6357 (-)
Type: TC
Location: 3766 - 6357 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp018265835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3176_c_128_2 | vegetarian > omnivore | 1.25272 | 0.00082 |